STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E9GBQ2_DAPPUUncharacterized protein. (498 aa)    
Predicted Functional Partners:
E9FWG6_DAPPU
Uncharacterized protein.
   
 
 0.962
EOG090X06RW
EOG090X06RW.
   
 
0.760
E9G324_DAPPU
Suf domain-containing protein.
    
 0.722
E9GYP6_DAPPU
Uncharacterized protein.
    
0.717
E9H1R4_DAPPU
Uncharacterized protein.
    
  0.693
E9G0I7_DAPPU
G-patch domain-containing protein.
   
 
 0.673
E9GLC6_DAPPU
G-patch domain-containing protein.
   
 
 0.673
E9H7I1_DAPPU
TPR_REGION domain-containing protein.
   
 
 0.666
EOG090X09UC
EOG090X09UC.
    
 0.594
E9H8K7_DAPPU
Uncharacterized protein.
    
  0.587
Your Current Organism:
Daphnia pulex
NCBI taxonomy Id: 6669
Other names: D. pulex, common water flea
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