STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E9GCS9_DAPPUZinc finger Ran-binding domain-containing protein 2. (214 aa)    
Predicted Functional Partners:
E9FVL5_DAPPU
Uncharacterized protein.
      
 0.697
E9FTR0_DAPPU
Uncharacterized protein.
   
 0.686
E9HAN4_DAPPU
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
     
 0.639
E9HCG7_DAPPU
Uncharacterized protein.
   
 0.613
E9HPX9_DAPPU
Uncharacterized protein.
   
 0.613
E9GLH0_DAPPU
TAFH domain-containing protein.
   
  0.599
EOG090X0HZC
EOG090X0HZC.
   
  0.595
E9H8L5_DAPPU
Uncharacterized protein.
   
 0.575
E9HP59_DAPPU
Uncharacterized protein.
     
 0.574
E9GLB8_DAPPU
Uncharacterized protein.
   
 0.570
Your Current Organism:
Daphnia pulex
NCBI taxonomy Id: 6669
Other names: D. pulex, common water flea
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