STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E9GL78_DAPPUEukaryotic translation initiation factor 5A. (160 aa)    
Predicted Functional Partners:
E9H500_DAPPU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 
 0.996
E9GXS2_DAPPU
KH type-2 domain-containing protein.
   
 
 0.992
E9HBC4_DAPPU
Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.
  
 
 0.992
E9HEA0_DAPPU
Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.
   
 
 0.992
EOG090X0JV9
EOG090X0JV9; Belongs to the universal ribosomal protein uS13 family.
  
 
 0.992
EOG090X09YS
EOG090X09YS.
   
 
 0.991
E9G8U3_DAPPU
Uncharacterized protein.
   
 
 0.991
E9H282_DAPPU
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.991
E9GCI1_DAPPU
Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.
   
 
 0.989
Rps6
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 
 0.987
Your Current Organism:
Daphnia pulex
NCBI taxonomy Id: 6669
Other names: D. pulex, common water flea
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