STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E9GWK1_DAPPUUncharacterized protein. (188 aa)    
Predicted Functional Partners:
E9H500_DAPPU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
   0.720
E9G055_DAPPU
OBG-type G domain-containing protein.
   
 
 0.660
E9H9Z6_DAPPU
Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.
   
 
 0.638
E9H282_DAPPU
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.635
E9GSP6_DAPPU
Uncharacterized protein.
   
 
 0.628
E9GXS2_DAPPU
KH type-2 domain-containing protein.
   
   0.628
E9HFF4_DAPPU
ABC protein, subfamily ABCF.
   
 
 0.628
E9FVZ4_DAPPU
Uncharacterized protein.
   
 
 0.614
EOG090X09YS
EOG090X09YS.
   
 
 0.611
E9HD61_DAPPU
WD_REPEATS_REGION domain-containing protein.
   
 
 0.604
Your Current Organism:
Daphnia pulex
NCBI taxonomy Id: 6669
Other names: D. pulex, common water flea
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.