STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E9HA45_DAPPUUbiquitin carboxyl-terminal hydrolase. (869 aa)    
Predicted Functional Partners:
E9FWZ8_DAPPU
Uncharacterized protein; Belongs to the peptidase M16 family.
 
 
    0.728
E9FST8_DAPPU
Uncharacterized protein.
   
 
 0.650
E9GJF3_DAPPU
Uncharacterized protein.
    
 0.622
E9GLT2_DAPPU
Tyrosine--tRNA ligase.
      
 0.595
E9HJ55_DAPPU
USP domain-containing protein; Belongs to the peptidase C19 family.
    
0.592
E9HC90_DAPPU
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
  0.558
E9GG03_DAPPU
Uncharacterized protein.
    
 
 0.537
E9H6Q8_DAPPU
Uncharacterized protein.
   
 
 0.532
E9HFI1_DAPPU
AAA domain-containing protein.
    
 0.522
E9G7U8_DAPPU
Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.519
Your Current Organism:
Daphnia pulex
NCBI taxonomy Id: 6669
Other names: D. pulex, common water flea
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