STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E9HCL3_DAPPUGRASP55_65 domain-containing protein. (278 aa)    
Predicted Functional Partners:
E9GL56_DAPPU
Uncharacterized protein.
   
 0.988
E9GDE0_DAPPU
Uncharacterized protein.
    
 0.946
E9G932_DAPPU
Uncharacterized protein.
   
 0.933
E9FV61_DAPPU
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.902
E9G6S9_DAPPU
Uncharacterized protein.
   
 0.892
E9FUW4_DAPPU
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.876
E9FU08_DAPPU
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.856
E9FW38_DAPPU
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 0.830
E9FW91_DAPPU
Uncharacterized protein.
   
 0.824
E9HUV8_DAPPU
Uncharacterized protein.
   
 0.793
Your Current Organism:
Daphnia pulex
NCBI taxonomy Id: 6669
Other names: D. pulex, common water flea
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