STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E9HQ36_DAPPUUncharacterized protein. (561 aa)    
Predicted Functional Partners:
E9HV90_DAPPU
Uncharacterized protein.
   
0.928
E9GCW2_DAPPU
SANT domain-containing protein.
    
 0.903
E9G2Z9_DAPPU
Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
    
 0.877
E9FSB9_DAPPU
Uncharacterized protein.
   
0.850
E9G1W0_DAPPU
Signal transducer and activator of transcription.
    
 0.659
E9H1W2_DAPPU
Uncharacterized protein.
    
 0.652
OTD1
Putative transcriptional factor Ocelliless/Orthodenticle protein.
  
 
 
 0.617
E9GYK9_DAPPU
Homeobox domain-containing protein.
      
 0.590
OTD2
Putative transcriptional factor orthodenticle 2 protein.
    
 
 0.584
E9GF35_DAPPU
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.563
Your Current Organism:
Daphnia pulex
NCBI taxonomy Id: 6669
Other names: D. pulex, common water flea
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