STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E9HUB1_DAPPUUncharacterized protein. (354 aa)    
Predicted Functional Partners:
E9GAR3_DAPPU
Uncharacterized protein.
      
 0.701
E9GAR5_DAPPU
Uncharacterized protein.
      
 0.701
E9GIC9_DAPPU
Uncharacterized protein.
    
 
 0.616
E9H4U5_DAPPU
Uncharacterized protein.
    
 
 0.616
E9H057_DAPPU
Uncharacterized protein.
      
 0.591
E9GVI6_DAPPU
Uncharacterized protein.
      
 0.553
E9GFN0_DAPPU
Uncharacterized protein.
      
 0.532
LAM2
Lamin-like protein.
    
 0.523
LAM1
Lamin-like protein; Belongs to the intermediate filament family.
    
 0.523
E9I4E1_DAPPU
Uncharacterized protein.
    
 0.523
Your Current Organism:
Daphnia pulex
NCBI taxonomy Id: 6669
Other names: D. pulex, common water flea
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.