STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC0094Thioredoxin reductase. (354 aa)    
Predicted Functional Partners:
ABC2428
2-cys peroxiredoxin.
  
 
 0.676
ABC0095
Conserved hypothetical protein.
       0.556
ABC0093
Ribosomal-protein-alanine acetyltransferase.
       0.552
ABC1042
Ferrichrome ABC transporter substrate-binding protein.
  
  
 0.491
ABC3476
Fe3+-hydroxamate ABC transporter substrate-binding protein.
  
  
 0.491
moeB
Molybdopterin biosynthesis protein MoeB.
  
    0.452
ABC3039
Conserved hypothetical protein.
 
 
 0.449
metS
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 
 0.426
trxA
Thioredoxin; Belongs to the thioredoxin family.
  
 
 0.424
ABC1874
30S ribosomal protein S1.
 
    0.420
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.