STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC0103Serine/threonine protein kinase. (327 aa)    
Predicted Functional Partners:
ABC0102
Conserved hypothetical protein.
 
  
 0.974
spoIIE
Serine phosphatase stage II sporulation protein E.
 
 
 0.947
ABC2536
Conserved hypothetical protein; Belongs to the UPF0736 family.
  
     0.744
ABC2484
Conserved hypothetical protein.
  
     0.742
spoIVFA
Stage IV sporulation protein FA.
  
    0.737
ABC0097
Conserved hypothetical protein.
 
     0.734
tilS
Cell-cycle protein; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.
       0.733
ABC2726
Conserved hypothetical protein.
  
    0.732
spoIIIAF
Stage III sporulation protein AF.
  
     0.723
ABC2626
Stage VI sporulation protein D.
  
     0.712
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.