ABC0181 protein (Bacillus clausii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Experiments

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[Homology]

Score

ABC0181

Cobalt ABC transporter permease. (264 aa)

Predicted Functional Partners:

ABC0179

0.999

ABC0180

0.999

ABC2607

0.977

truA

0.954

ABC1935

0.916

ABC1934

0.824

rplQ

0.679

rpoA

0.608

ABC0231

0.588

ABC3093

0.588

Your Current Organism:

Bacillus clausii

NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABC0179	ABC0180	ABC0179	ABC0180	Cobalt ABC transporter ATP-binding protein.	Cobalt ABC transporter ATP-binding protein.	0.993
ABC0179	ABC0181	ABC0179	ABC0181	Cobalt ABC transporter ATP-binding protein.	Cobalt ABC transporter permease.	0.999
ABC0179	ABC1935	ABC0179	ABC1935	Cobalt ABC transporter ATP-binding protein.	Cobalt ABC transporter permease.	0.989
ABC0179	ABC2607	ABC0179	ABC2607	Cobalt ABC transporter ATP-binding protein.	Biotin biosynthesis protein BioY.	0.962
ABC0179	rplQ	ABC0179	ABC0178	Cobalt ABC transporter ATP-binding protein.	50S ribosomal protein L17.	0.717
ABC0179	rpoA	ABC0179	ABC0177	Cobalt ABC transporter ATP-binding protein.	DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.634
ABC0179	truA	ABC0179	ABC0182	Cobalt ABC transporter ATP-binding protein.	Pseudouridylate synthase I; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.	0.954
ABC0180	ABC0179	ABC0180	ABC0179	Cobalt ABC transporter ATP-binding protein.	Cobalt ABC transporter ATP-binding protein.	0.993
ABC0180	ABC0181	ABC0180	ABC0181	Cobalt ABC transporter ATP-binding protein.	Cobalt ABC transporter permease.	0.999
ABC0180	ABC1935	ABC0180	ABC1935	Cobalt ABC transporter ATP-binding protein.	Cobalt ABC transporter permease.	0.983
ABC0180	ABC2607	ABC0180	ABC2607	Cobalt ABC transporter ATP-binding protein.	Biotin biosynthesis protein BioY.	0.961
ABC0180	rplQ	ABC0180	ABC0178	Cobalt ABC transporter ATP-binding protein.	50S ribosomal protein L17.	0.729
ABC0180	rpoA	ABC0180	ABC0177	Cobalt ABC transporter ATP-binding protein.	DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.631
ABC0180	truA	ABC0180	ABC0182	Cobalt ABC transporter ATP-binding protein.	Pseudouridylate synthase I; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.	0.954
ABC0181	ABC0179	ABC0181	ABC0179	Cobalt ABC transporter permease.	Cobalt ABC transporter ATP-binding protein.	0.999
ABC0181	ABC0180	ABC0181	ABC0180	Cobalt ABC transporter permease.	Cobalt ABC transporter ATP-binding protein.	0.999
ABC0181	ABC0231	ABC0181	ABC0231	Cobalt ABC transporter permease.	Dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein.	0.588
ABC0181	ABC1934	ABC0181	ABC1934	Cobalt ABC transporter permease.	Cobalt ABC transporter ATP-binding protein.	0.824
ABC0181	ABC1935	ABC0181	ABC1935	Cobalt ABC transporter permease.	Cobalt ABC transporter permease.	0.916
ABC0181	ABC2607	ABC0181	ABC2607	Cobalt ABC transporter permease.	Biotin biosynthesis protein BioY.	0.977