Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABC0116 | truA | ABC0116 | ABC0182 | tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Pseudouridylate synthase I; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 0.660 |
| ABC0116 | truB | ABC0116 | ABC2225 | tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.446 |
| ABC0179 | ABC0180 | ABC0179 | ABC0180 | Cobalt ABC transporter ATP-binding protein. | Cobalt ABC transporter ATP-binding protein. | 0.993 |
| ABC0179 | ABC0181 | ABC0179 | ABC0181 | Cobalt ABC transporter ATP-binding protein. | Cobalt ABC transporter permease. | 0.999 |
| ABC0179 | rplM | ABC0179 | ABC0183 | Cobalt ABC transporter ATP-binding protein. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.637 |
| ABC0179 | rplQ | ABC0179 | ABC0178 | Cobalt ABC transporter ATP-binding protein. | 50S ribosomal protein L17. | 0.717 |
| ABC0179 | rpoA | ABC0179 | ABC0177 | Cobalt ABC transporter ATP-binding protein. | DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.634 |
| ABC0179 | rpsI | ABC0179 | ABC0184 | Cobalt ABC transporter ATP-binding protein. | 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.714 |
| ABC0179 | truA | ABC0179 | ABC0182 | Cobalt ABC transporter ATP-binding protein. | Pseudouridylate synthase I; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 0.954 |
| ABC0180 | ABC0179 | ABC0180 | ABC0179 | Cobalt ABC transporter ATP-binding protein. | Cobalt ABC transporter ATP-binding protein. | 0.993 |
| ABC0180 | ABC0181 | ABC0180 | ABC0181 | Cobalt ABC transporter ATP-binding protein. | Cobalt ABC transporter permease. | 0.999 |
| ABC0180 | rplM | ABC0180 | ABC0183 | Cobalt ABC transporter ATP-binding protein. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.647 |
| ABC0180 | rplQ | ABC0180 | ABC0178 | Cobalt ABC transporter ATP-binding protein. | 50S ribosomal protein L17. | 0.729 |
| ABC0180 | rpoA | ABC0180 | ABC0177 | Cobalt ABC transporter ATP-binding protein. | DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.631 |
| ABC0180 | rpsI | ABC0180 | ABC0184 | Cobalt ABC transporter ATP-binding protein. | 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.752 |
| ABC0180 | truA | ABC0180 | ABC0182 | Cobalt ABC transporter ATP-binding protein. | Pseudouridylate synthase I; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 0.954 |
| ABC0181 | ABC0179 | ABC0181 | ABC0179 | Cobalt ABC transporter permease. | Cobalt ABC transporter ATP-binding protein. | 0.999 |
| ABC0181 | ABC0180 | ABC0181 | ABC0180 | Cobalt ABC transporter permease. | Cobalt ABC transporter ATP-binding protein. | 0.999 |
| ABC0181 | rplM | ABC0181 | ABC0183 | Cobalt ABC transporter permease. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.568 |
| ABC0181 | rplQ | ABC0181 | ABC0178 | Cobalt ABC transporter permease. | 50S ribosomal protein L17. | 0.679 |
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