STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC0237Oligopeptide ABC transporter substrate-binding protein. (523 aa)    
Predicted Functional Partners:
ABC0031
Oligopeptide ABC transporter permease.
 
 0.827
ABC1241
Oligopeptide ABC transporter permease.
 
 0.824
ABC1242
Oligopeptide ABC transporter permease.
 
 0.820
ABC0032
Oligopeptide ABC transporter permease.
 
 0.817
ABC0565
Oligopeptide ABC transporter permease.
 
 0.817
ABC3660
Oligopeptide ABC transporter permease.
 
 0.815
ABC0566
Oligopeptide ABC transporter permease.
 
 0.807
ABC1609
Oligopeptide ABC transporter permease.
 
 0.807
ABC0233
Dipeptide/oligopeptide/nickel ABC transporter permease.
 
 0.794
ABC0232
Dipeptide/oligopeptide/nickel ABC transporter permease.
 
 0.781
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.