STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC0261Multidrug ABC transporter ATP-binding protein. (288 aa)    
Predicted Functional Partners:
ABC0260
GntR family transcriptional regulator.
 
  
 0.952
ABC0262
Multidrug ABC transporter permease.
 
     0.937
ABC3186
Multidrug ABC transporter permease.
 
  
 0.764
ABC3918
GntR family transcriptional regulator.
  
 0.711
ABC3132
GntR family transcriptional regulator.
 
  
 0.648
ABC1460
GntR family transcriptional regulator.
 
  
 0.635
ABC3639
Bacitracin ABC transporter permease.
 
 
 0.587
ABC0213
PadR family transcriptional regulator.
 
    0.565
ABC1172
Multidrug ABC transporter permease.
 
 
 0.521
ABC0212
Conserved hypothetical protein.
  
     0.514
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.