STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC0268Cadmium efflux system accessory protein. (125 aa)    
Predicted Functional Partners:
ABC0269
Cadmium-transporting ATPase.
 
  
 0.809
ABC3711
ArsR family transcriptional regulator.
  
   
 0.649
ABC3349
Cation-transporting ATPase.
 
  
 0.578
arsR
ArsR family transcriptional regulator.
 
  
0.544
ABC0224
Copper-transporting ATPase.
 
  
 0.523
ABC3231
Copper-transporting ATPase.
 
  
 0.523
ABC0835
ArsR family transcriptional regulator.
 
  
0.510
trkA
Trk family potassium transport system protein.
  
    0.483
ABC0267
Aminoglycoside nucleotidyltransferase.
       0.401
ABC0836
Arsenic efflux pump; Involved in arsenical resistance. Thought to form the channel of an arsenite pump; Belongs to the ArsB family.
 
  
 0.400
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.