STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC0314Transcriptional regulator. (334 aa)    
Predicted Functional Partners:
ABC3473
Conserved hypothetical protein.
  
     0.765
gltA
Glutamate synthase large subunit.
    
 
 0.761
ptsH
PTS system histidine-containing phosphocarrier protein HPr.
   
 
 0.512
ABC0313
Conserved hypothetical protein.
       0.474
ABC0312
BC component PTS system sucrose-specific enzyme II.
  
  
 0.472
ABC0315
Beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
     
 0.466
ABC0316
Transcriptional regulator.
     
 0.414
ABC1454
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
 
     0.412
murQ
Glucokinase regulatory protein; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
       0.410
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.