STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC0320Mannan endo-1,4-beta-mannosidase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (324 aa)    
Predicted Functional Partners:
ABC0393
Conserved hypothetical protein.
 
 
 0.900
levD
A component PTS system mannose-specific enzyme II.
     
  0.900
levG
D component PTS system mannose-specific enzyme II.
     
  0.900
ABC3225
Fructokinase.
     
  0.800
ABC0319
Sugar ABC transporter substrate-binding protein.
       0.781
pelB
Pectate lyase.
 
  
 0.771
ABC3381
Glycosyl hydrolase.
  
     0.710
ABC3517
Arabinogalactan endo-1,4-beta-galactosidase.
 
  
 0.668
ABC0646
Chitinase; Belongs to the glycosyl hydrolase 18 family.
  
  
 0.666
ABC3369
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.619
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.