Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABC0020 | ABC0023 | ABC0020 | ABC0023 | Xaa-Pro dipeptidase. | Homoserine dehydrogenase. | 0.755 |
ABC0020 | ABC3489 | ABC0020 | ABC3489 | Xaa-Pro dipeptidase. | L-proline 4-hydroxylase. | 0.948 |
ABC0020 | ectA | ABC0020 | ABC0334 | Xaa-Pro dipeptidase. | L-2,4-diaminobutyric acid acetyltransferase; Catalyzes the acetylation of L-2,4-diaminobutyrate (DABA) to gamma-N-acetyl-alpha,gamma-diaminobutyric acid (ADABA) with acetyl coenzyme A. | 0.577 |
ABC0020 | ectB | ABC0020 | ABC0335 | Xaa-Pro dipeptidase. | Diaminobutyrate--pyruvate aminotransferase; Catalyzes reversively the conversion of L-aspartate beta- semialdehyde (ASA) to L-2,4-diaminobutyrate (DABA) by transamination with L-glutamate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.576 |
ABC0020 | ectC | ABC0020 | ABC0336 | Xaa-Pro dipeptidase. | Ectoine synthase; Catalyzes the circularization of gamma-N-acetyl-alpha,gamma- diaminobutyric acid (ADABA) to ectoine (1,4,5,6-tetrahydro-2-methyl-4- pyrimidine carboxylic acid), which is an excellent osmoprotectant. | 0.954 |
ABC0023 | ABC0020 | ABC0023 | ABC0020 | Homoserine dehydrogenase. | Xaa-Pro dipeptidase. | 0.755 |
ABC0023 | ABC1578 | ABC0023 | ABC1578 | Homoserine dehydrogenase. | Homoserine dehydrogenase. | 0.922 |
ABC0023 | asd | ABC0023 | ABC2216 | Homoserine dehydrogenase. | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.959 |
ABC0023 | ectB | ABC0023 | ABC0335 | Homoserine dehydrogenase. | Diaminobutyrate--pyruvate aminotransferase; Catalyzes reversively the conversion of L-aspartate beta- semialdehyde (ASA) to L-2,4-diaminobutyrate (DABA) by transamination with L-glutamate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.909 |
ABC0023 | hom | ABC0023 | ABC2942 | Homoserine dehydrogenase. | Homoserine dehydrogenase. | 0.922 |
ABC0910 | ABC3489 | ABC0910 | ABC3489 | Amino acid ABC transporter substrate-binding protein. | L-proline 4-hydroxylase. | 0.627 |
ABC0910 | ectA | ABC0910 | ABC0334 | Amino acid ABC transporter substrate-binding protein. | L-2,4-diaminobutyric acid acetyltransferase; Catalyzes the acetylation of L-2,4-diaminobutyrate (DABA) to gamma-N-acetyl-alpha,gamma-diaminobutyric acid (ADABA) with acetyl coenzyme A. | 0.515 |
ABC0910 | ectB | ABC0910 | ABC0335 | Amino acid ABC transporter substrate-binding protein. | Diaminobutyrate--pyruvate aminotransferase; Catalyzes reversively the conversion of L-aspartate beta- semialdehyde (ASA) to L-2,4-diaminobutyrate (DABA) by transamination with L-glutamate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.529 |
ABC0910 | ectC | ABC0910 | ABC0336 | Amino acid ABC transporter substrate-binding protein. | Ectoine synthase; Catalyzes the circularization of gamma-N-acetyl-alpha,gamma- diaminobutyric acid (ADABA) to ectoine (1,4,5,6-tetrahydro-2-methyl-4- pyrimidine carboxylic acid), which is an excellent osmoprotectant. | 0.525 |
ABC1578 | ABC0023 | ABC1578 | ABC0023 | Homoserine dehydrogenase. | Homoserine dehydrogenase. | 0.922 |
ABC1578 | asd | ABC1578 | ABC2216 | Homoserine dehydrogenase. | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.962 |
ABC1578 | ectB | ABC1578 | ABC0335 | Homoserine dehydrogenase. | Diaminobutyrate--pyruvate aminotransferase; Catalyzes reversively the conversion of L-aspartate beta- semialdehyde (ASA) to L-2,4-diaminobutyrate (DABA) by transamination with L-glutamate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.909 |
ABC1578 | hom | ABC1578 | ABC2942 | Homoserine dehydrogenase. | Homoserine dehydrogenase. | 0.921 |
ABC3489 | ABC0020 | ABC3489 | ABC0020 | L-proline 4-hydroxylase. | Xaa-Pro dipeptidase. | 0.948 |
ABC3489 | ABC0910 | ABC3489 | ABC0910 | L-proline 4-hydroxylase. | Amino acid ABC transporter substrate-binding protein. | 0.627 |
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