STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC0337Glycerol-3-phosphate ABC transporter substrate-binding protein. (432 aa)    
Predicted Functional Partners:
ABC0339
Glycerol-3-phosphate ABC transporter permease.
 
 
 0.956
ABC0340
Glycerol-3-phosphate ABC transporter permease.
 
 
 0.952
ABC0338
Sugar phosphate isomerases/epimerase.
 
    0.913
ABC0341
Glycerol-3-phosphate ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 
 0.857
ABC0354
Glycerol-3-phosphate ABC transporter permease.
 
 
 0.812
ABC0353
Glycerol-3-phosphate ABC transporter permease.
 
 
 0.807
ABC3124
Sugar ABC transporter permease.
 
 
 0.709
ABC3441
Sugar ABC transporter permease.
 
 
 0.696
ABC3440
Sugar ABC transporter permease.
 
 
 0.691
ABC0686
Sugar ABC transporter permease.
 
 
 0.678
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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