STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC0341Glycerol-3-phosphate ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (392 aa)    
Predicted Functional Partners:
ABC0340
Glycerol-3-phosphate ABC transporter permease.
 
 0.985
ABC0339
Glycerol-3-phosphate ABC transporter permease.
 
 0.981
ABC0353
Glycerol-3-phosphate ABC transporter permease.
 
 0.917
ABC0354
Glycerol-3-phosphate ABC transporter permease.
 
 0.914
ABC0352
Glycerol-3-phosphate ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
  
  
 
0.910
ABC0355
Glycerol-3-phosphate ABC transporter substrate-binding protein.
  
 0.901
ABC0337
Glycerol-3-phosphate ABC transporter substrate-binding protein.
  
 
 0.857
ABC3518
Sugar ABC transporter permease.
 
 
 0.822
ABC3469
Sugar ABC transporter permease.
 
 
 0.820
ABC3470
Sugar ABC transporter permease.
 
 
 0.809
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.