STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC0345acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (394 aa)    
Predicted Functional Partners:
ABC2990
3-hydroxyacyl-CoA dehydrogenase.
 
 0.999
mmgB
3-hydroxybutyryl-CoA dehydrogenase.
 0.997
pta
Phosphotransacetylase.
    
 0.951
pdhC
Pyruvate dehydrogenase E2 component.
  
 
 0.949
acsA
Acetyl-coenzyme A synthetase.
  
 
 0.940
ABC3255
Acetyl-coenzyme A synthetase.
  
 
 0.940
scoE
succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B.
  
 
 0.932
ABC0547
hydroxymethylglutaryl-CoA lyase.
  
 
 0.931
scoA
succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A.
  
 
 0.931
leuA
2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.
  
 
 0.929
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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