STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC0360mRNA-binding transcriptional antiterminator of glycerol uptake operon; Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA. (176 aa)    
Predicted Functional Partners:
ABC0359
HAD superfamily sugar phosphatases.
       0.783
ABC0361
Polysaccharide ABC transporter permease.
       0.746
ABC0362
Polysaccharide ABC transporter permease.
  
    0.729
ABC0363
Glycerophosphoryl diester phosphodiesterase.
       0.726
glpF
Glycerol uptake facilitator; Belongs to the MIP/aquaporin (TC 1.A.8) family.
 
  
 0.521
ABC0341
Glycerol-3-phosphate ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
  
    0.511
ABC0352
Glycerol-3-phosphate ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
  
    0.511
msmX
Sugar ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
  
    0.511
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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