STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rhaABRhamnulokinase and L-rhamnose isomerase; In the N-terminal section; belongs to the rhamnulokinase family. (894 aa)    
Predicted Functional Partners:
rhaM
Conserved hypothetical protein; Involved in the anomeric conversion of L-rhamnose.
 
 
 0.991
ABC0375
Conserved hypothetical protein.
 
   
 0.872
iolF
Major facilitator superfamily (MFS) family inositol transporter.
 
  
 0.774
ABC0373
AraC/XylS family transcriptional regulator.
 
  
 0.747
xylB
Xylose kinase.
 
  
0.743
gntK
Gluconokinase; Belongs to the FGGY kinase family.
 
  
0.736
ABC0381
Sugar phosphate isomerases/epimerase.
 
    0.519
ABC0379
Oxidoreductase.
 
    0.451
ABC0378
AraC/XylS family transcriptional regulator.
  
  
 0.434
ABC3437
Conserved hypothetical protein.
  
    0.430
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.