STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rhaABannotation not available (894 aa)    
Predicted Functional Partners:
rhaM
L-rhamnose mutarotase; Involved in the anomeric conversion of L-rhamnose
 
   
 0.966
ABC0375
annotation not available
 
   
 0.962
araD
annotation not available
 
  
 0.839
ABC4076
annotation not available
 
  
 0.792
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose
 
   
 0.779
iolF
annotation not available
 
   
 0.768
ABC0378
annotation not available
 
  
 0.756
ABC0373
annotation not available
 
     0.704
xylA
annotation not available
  
  
 0.704
tpi
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family
     
 0.681
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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