Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABC0375 | ABC0380 | ABC0375 | ABC0380 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.616 |
ABC0375 | ABC0381 | ABC0375 | ABC0381 | Conserved hypothetical protein. | Sugar phosphate isomerases/epimerase. | 0.696 |
ABC0375 | gntK | ABC0375 | ABC2000 | Conserved hypothetical protein. | Gluconokinase; Belongs to the FGGY kinase family. | 0.457 |
ABC0375 | iolF | ABC0375 | ABC0377 | Conserved hypothetical protein. | Major facilitator superfamily (MFS) family inositol transporter. | 0.691 |
ABC0375 | rhaAB | ABC0375 | ABC0374 | Conserved hypothetical protein. | Rhamnulokinase and L-rhamnose isomerase; In the N-terminal section; belongs to the rhamnulokinase family. | 0.872 |
ABC0375 | rhaM | ABC0375 | ABC0376 | Conserved hypothetical protein. | Conserved hypothetical protein; Involved in the anomeric conversion of L-rhamnose. | 0.884 |
ABC0375 | xylB | ABC0375 | ABC0573 | Conserved hypothetical protein. | Xylose kinase. | 0.457 |
ABC0380 | ABC0375 | ABC0380 | ABC0375 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.616 |
ABC0380 | ABC0381 | ABC0380 | ABC0381 | Conserved hypothetical protein. | Sugar phosphate isomerases/epimerase. | 0.953 |
ABC0380 | iolF | ABC0380 | ABC0377 | Conserved hypothetical protein. | Major facilitator superfamily (MFS) family inositol transporter. | 0.435 |
ABC0380 | rhaM | ABC0380 | ABC0376 | Conserved hypothetical protein. | Conserved hypothetical protein; Involved in the anomeric conversion of L-rhamnose. | 0.525 |
ABC0381 | ABC0375 | ABC0381 | ABC0375 | Sugar phosphate isomerases/epimerase. | Conserved hypothetical protein. | 0.696 |
ABC0381 | ABC0380 | ABC0381 | ABC0380 | Sugar phosphate isomerases/epimerase. | Conserved hypothetical protein. | 0.953 |
ABC0381 | iolD | ABC0381 | ABC0425 | Sugar phosphate isomerases/epimerase. | Myo-inositol catabolism protein IolD; Involved in the cleavage of the C1-C2 bond of 3D-(3,5/4)- trihydroxycyclohexane-1,2-dione (THcHDO) to yield 5-deoxy-glucuronate (5DG). | 0.526 |
ABC0381 | iolF | ABC0381 | ABC0377 | Sugar phosphate isomerases/epimerase. | Major facilitator superfamily (MFS) family inositol transporter. | 0.463 |
ABC0381 | rhaAB | ABC0381 | ABC0374 | Sugar phosphate isomerases/epimerase. | Rhamnulokinase and L-rhamnose isomerase; In the N-terminal section; belongs to the rhamnulokinase family. | 0.519 |
ABC0381 | rhaM | ABC0381 | ABC0376 | Sugar phosphate isomerases/epimerase. | Conserved hypothetical protein; Involved in the anomeric conversion of L-rhamnose. | 0.520 |
glcP | rhaM | ABC1131 | ABC0376 | Conserved hypothetical protein. | Conserved hypothetical protein; Involved in the anomeric conversion of L-rhamnose. | 0.744 |
gntK | ABC0375 | ABC2000 | ABC0375 | Gluconokinase; Belongs to the FGGY kinase family. | Conserved hypothetical protein. | 0.457 |
gntK | rhaAB | ABC2000 | ABC0374 | Gluconokinase; Belongs to the FGGY kinase family. | Rhamnulokinase and L-rhamnose isomerase; In the N-terminal section; belongs to the rhamnulokinase family. | 0.736 |
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