STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC0379Oxidoreductase. (390 aa)    
Predicted Functional Partners:
ABC0381
Sugar phosphate isomerases/epimerase.
 
    0.960
ABC0380
Conserved hypothetical protein.
 
    0.946
ABC0382
Oxidoreductase.
 
     0.901
ABC0385
Lactose ABC transporter substrate-binding protein.
 
     0.660
ABC0375
Conserved hypothetical protein.
 
    0.626
ABC0378
AraC/XylS family transcriptional regulator.
 
    0.609
ABC0394
Lactose ABC transporter substrate-binding protein.
  
     0.599
ABC3277
Dehydrogenase.
 
     0.572
ABC1152
Oxidoreductase.
  
     0.562
rhaM
Conserved hypothetical protein; Involved in the anomeric conversion of L-rhamnose.
 
    0.501
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.