STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC0394Lactose ABC transporter substrate-binding protein. (470 aa)    
Predicted Functional Partners:
ABC0395
Lactose ABC transporter permease.
 
 
 0.911
ABC0393
Conserved hypothetical protein.
 
  
 0.905
ABC0396
Lactose ABC transporter permease.
 
 
 0.885
ABC0386
Lactose ABC transporter permease.
 
 
 0.851
ABC0387
Lactose ABC transporter permease.
 
 
 0.824
abfA
alpha-L-arabinofuranosidase.
 
  
 0.717
ABC0380
Conserved hypothetical protein.
 
     0.688
ABC1144
Sugar ABC transporter substrate-binding protein.
  
  
 0.675
ABC0381
Sugar phosphate isomerases/epimerase.
 
    0.665
ABC3281
Sugar ABC transporter permease.
 
 
 0.651
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.