Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABC0409 | araA | ABC0409 | ABC0408 | Ribose ABC transporter substrate-binding protein. | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | 0.692 |
| ABC0409 | araB | ABC0409 | ABC0407 | Ribose ABC transporter substrate-binding protein. | L-ribulokinase. | 0.679 |
| ABC0409 | araD | ABC0409 | ABC0406 | Ribose ABC transporter substrate-binding protein. | L-ribulose-5-phosphate 4-epimerase. | 0.622 |
| ABC0409 | araL | ABC0409 | ABC0404 | Ribose ABC transporter substrate-binding protein. | L-arabinose operon protein AraL. | 0.470 |
| ABC0409 | araM | ABC0409 | ABC0405 | Ribose ABC transporter substrate-binding protein. | L-arabinose operon protein AraM; Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol 1- phosphate (G1P). The G1P thus generated is probably used for the synthesis of phosphoglycerolipids in Gram-positive bacterial species. Belongs to the glycerol-1-phosphate dehydrogenase family. | 0.496 |
| ABC3437 | araB | ABC3437 | ABC0407 | Conserved hypothetical protein. | L-ribulokinase. | 0.918 |
| ABC3437 | araD | ABC3437 | ABC0406 | Conserved hypothetical protein. | L-ribulose-5-phosphate 4-epimerase. | 0.924 |
| abfA | araA | ABC0397 | ABC0408 | alpha-L-arabinofuranosidase. | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | 0.954 |
| abfA | araB | ABC0397 | ABC0407 | alpha-L-arabinofuranosidase. | L-ribulokinase. | 0.590 |
| abfA | araD | ABC0397 | ABC0406 | alpha-L-arabinofuranosidase. | L-ribulose-5-phosphate 4-epimerase. | 0.657 |
| abfA | araL | ABC0397 | ABC0404 | alpha-L-arabinofuranosidase. | L-arabinose operon protein AraL. | 0.458 |
| abfA | araM | ABC0397 | ABC0405 | alpha-L-arabinofuranosidase. | L-arabinose operon protein AraM; Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol 1- phosphate (G1P). The G1P thus generated is probably used for the synthesis of phosphoglycerolipids in Gram-positive bacterial species. Belongs to the glycerol-1-phosphate dehydrogenase family. | 0.710 |
| abfA | uxaC | ABC0397 | ABC0995 | alpha-L-arabinofuranosidase. | Uronate isomerase. | 0.826 |
| araA | ABC0409 | ABC0408 | ABC0409 | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | Ribose ABC transporter substrate-binding protein. | 0.692 |
| araA | abfA | ABC0408 | ABC0397 | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | alpha-L-arabinofuranosidase. | 0.954 |
| araA | araB | ABC0408 | ABC0407 | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | L-ribulokinase. | 0.998 |
| araA | araD | ABC0408 | ABC0406 | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | L-ribulose-5-phosphate 4-epimerase. | 0.995 |
| araA | araL | ABC0408 | ABC0404 | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | L-arabinose operon protein AraL. | 0.858 |
| araA | araM | ABC0408 | ABC0405 | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | L-arabinose operon protein AraM; Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol 1- phosphate (G1P). The G1P thus generated is probably used for the synthesis of phosphoglycerolipids in Gram-positive bacterial species. Belongs to the glycerol-1-phosphate dehydrogenase family. | 0.854 |
| araB | ABC0409 | ABC0407 | ABC0409 | L-ribulokinase. | Ribose ABC transporter substrate-binding protein. | 0.679 |
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