Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABC0383 | ABC0416 | ABC0383 | ABC0416 | Two-component sensor histidine kinase. | LytR/AlgR family response regulator. | 0.486 |
ABC0414 | ABC0415 | ABC0414 | ABC0415 | Conserved hypothetical protein. | Hypothetical protein. | 0.624 |
ABC0414 | ABC0416 | ABC0414 | ABC0416 | Conserved hypothetical protein. | LytR/AlgR family response regulator. | 0.547 |
ABC0415 | ABC0414 | ABC0415 | ABC0414 | Hypothetical protein. | Conserved hypothetical protein. | 0.624 |
ABC0415 | ABC0416 | ABC0415 | ABC0416 | Hypothetical protein. | LytR/AlgR family response regulator. | 0.923 |
ABC0415 | ABC0417 | ABC0415 | ABC0417 | Hypothetical protein. | Conserved hypothetical protein. | 0.521 |
ABC0415 | ABC0418 | ABC0415 | ABC0418 | Hypothetical protein. | Conserved hypothetical protein. | 0.583 |
ABC0416 | ABC0383 | ABC0416 | ABC0383 | LytR/AlgR family response regulator. | Two-component sensor histidine kinase. | 0.486 |
ABC0416 | ABC0414 | ABC0416 | ABC0414 | LytR/AlgR family response regulator. | Conserved hypothetical protein. | 0.547 |
ABC0416 | ABC0415 | ABC0416 | ABC0415 | LytR/AlgR family response regulator. | Hypothetical protein. | 0.923 |
ABC0416 | ABC0417 | ABC0416 | ABC0417 | LytR/AlgR family response regulator. | Conserved hypothetical protein. | 0.525 |
ABC0416 | ABC0418 | ABC0416 | ABC0418 | LytR/AlgR family response regulator. | Conserved hypothetical protein. | 0.525 |
ABC0416 | ABC0725 | ABC0416 | ABC0725 | LytR/AlgR family response regulator. | Two-component sensor histidine kinase. | 0.489 |
ABC0416 | ABC1133 | ABC0416 | ABC1133 | LytR/AlgR family response regulator. | Two-component sensor histidine kinase. | 0.468 |
ABC0416 | ABC3586 | ABC0416 | ABC3586 | LytR/AlgR family response regulator. | Two-component sensor histidine kinase. | 0.488 |
ABC0416 | ABC3647 | ABC0416 | ABC3647 | LytR/AlgR family response regulator. | Two-component sensor histidine kinase. | 0.616 |
ABC0416 | lytS | ABC0416 | ABC4058 | LytR/AlgR family response regulator. | Two-component sensor histidine kinase. | 0.688 |
ABC0417 | ABC0415 | ABC0417 | ABC0415 | Conserved hypothetical protein. | Hypothetical protein. | 0.521 |
ABC0417 | ABC0416 | ABC0417 | ABC0416 | Conserved hypothetical protein. | LytR/AlgR family response regulator. | 0.525 |
ABC0417 | ABC0418 | ABC0417 | ABC0418 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.986 |
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