STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC0431Conserved hypothetical protein. (207 aa)    
Predicted Functional Partners:
ABC3402
Conserved hypothetical protein.
 
     0.738
ABC2953
Conserved hypothetical protein.
  
     0.524
gerAA
Sopre germination protein.
 
  
 0.517
ABC2003
Sopre germination protein.
 
  
 0.516
ABC0430
Na+:myo-inositol cotransporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.486
ABC1797
Stage V sporulation protein AD.
 
  
 0.477
ABC3835
Spore germination protein.
 
  
 0.455
spoVAD
Stage V sporulation protein AD.
 
  
 0.450
ABC3491
Spore germination protein KA.
 
  
 0.444
ABC0332
Germination protein.
 
  
 0.435
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.