STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC0472GntR family transcriptional regulator. (231 aa)    
Predicted Functional Partners:
ABC0546
Transcriptional regulator.
 
  
 0.764
ABC4081
GntR family transcriptional regulator.
 
  
 0.749
ABC1486
GntR family transcriptional regulator.
  
    0.624
ABC1488
GntR family transcriptional regulator.
  
    0.610
ABC0491
GntR family transcriptional regulator.
  
    0.604
ABC4047
GntR family transcriptional regulator.
 
  
 0.571
ABC0645
GntR family transcriptional regulator.
  
    0.561
ABC0471
5-dehydro-4-deoxyglucarate dehydratase; Belongs to the DapA family.
 
   
 0.557
ABC2077
GntR family transcriptional regulator.
  
    0.544
ABC0604
GntR family transcriptional regulator.
 
  
 0.526
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.