STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC0473Hypothetical protein. (881 aa)    
Predicted Functional Partners:
ABC0474
Beta 1,4 glucosyltransferase.
 
  
 0.821
ABC2828
Hypothetical protein.
  
     0.749
ABC1483
Conserved hypothetical protein.
 
  
 0.737
ABC3023
Response regulator aspartate phosphatase.
  
     0.637
ABC1342
Phage-related protein.
  
   0.568
ABC1709
Conserved hypothetical protein.
    
 
 0.521
ABC3062
Carboxyl-terminal processing protease; Belongs to the peptidase S41A family.
  
   0.474
ABC0320
Mannan endo-1,4-beta-mannosidase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
 
 0.473
ABC1267
Nitric-oxide synthase oxygenase subunit; Catalyzes the production of nitric oxide. Belongs to the NOS family. Bacterial NOS oxygenase subfamily.
  
     0.451
ABC0691
DNA segregation ATPase.
   
 
 0.425
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.