STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC0474Beta 1,4 glucosyltransferase. (365 aa)    
Predicted Functional Partners:
ABC0473
Hypothetical protein.
 
  
 0.821
cheV
Chemotaxis protein CheV.
 
  
 0.542
ABC3482
Conserved hypothetical protein.
  
  
 0.523
ABC0513
Glycosyltransferase.
  
 
 0.511
ABC0906
Conserved hypothetical protein.
 
  
 0.502
ABC1726
Conserved hypothetical protein.
  
  
 0.495
ABC0509
Conserved hypothetical protein.
  
 
 0.494
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
  
 0.445
ABC3638
Conserved hypothetical protein.
 
     0.443
fliI
Flagellum-specific ATP synthase.
  
 
 0.432
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.