STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABC0480Conserved hypothetical protein. (271 aa)    
Predicted Functional Partners:
ABC2090
Conserved hypothetical protein.
  
  
 0.672
ABC3499
Carboxylic ester hydrolase.
  
   
 0.600
ABC0479
Hypothetical protein.
     
 0.479
ABC3525
Drug/metabolite transporter (DMT) superfamily protein.
 
 
   0.470
ABC0481
B component PTS system cellobiose-specific enzyme II.
       0.449
ABC0478
Hypothetical protein.
     
 0.427
ABC1959
DMT superfamily drug/metabolite transporter.
 
 
   0.427
ABC0957
Aminoglycoside phosphotransferase.
 
     0.423
ABC3900
Conserved hypothetical protein.
  
     0.412
ABC0249
Hypothetical protein.
 
     0.402
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.