STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC0505Conserved hypothetical protein. (159 aa)    
Predicted Functional Partners:
ABC0501
Coproporphyrinogen III oxidase.
 
    0.783
ABC0503
S-adenosylmethionine (SAM)-dependent methyltransferase.
     
 0.776
ABC0504
Hypothetical protein.
       0.773
ABC0506
Major facilitator (MFS) superfamily protein.
       0.773
ABC0507
GNAT family acetyltransferase.
       0.773
ABC0502
Hypothetical protein.
       0.757
ABC0500
Conserved hypothetical protein.
 
     0.756
ABC0499
Uncharacterized protein; Probable gene remnant. Similar to the N-terminal region of glycerate kinase fragment (EC:2.7.1.31).
       0.479
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.