STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC0515Hypothetical protein. (59 aa)    
Predicted Functional Partners:
ABC0279
GNAT family acetyltransferase; Probable gene remnant. Similar to the C-terminal region of Bacillus subtilis YdfD protein SW:P96681 (482 aa); locus_tag:ABC0277.
 
   0.702
ABC0496
Conserved hypothetical protein.
  
     0.583
ABC2255
Flagellar biosynthetic protein.
  
     0.549
ABC2094
Conserved hypothetical protein.
  
     0.545
ABC1482
Conserved hypothetical protein.
  
     0.544
ABC3324
Hypothetical protein.
  
     0.526
ABC0392
Hypothetical protein.
  
     0.511
ABC3134
Conserved hypothetical protein.
  
     0.509
ABC0280
Conserved hypothetical protein.
  
     0.479
ABC1280
Lysine/ornithine N-monooxygenase.
  
  
 0.452
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.