Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ABC0545Conserved hypothetical protein; Belongs to the CoA-transferase III family. (403 aa)    
Predicted Functional Partners:
ABC0547
hydroxymethylglutaryl-CoA lyase.
 
 
 0.840
ABC0343
medium-chain-fatty-acid--CoA ligase.
 
  
 0.634
hom
Homoserine dehydrogenase.
  
   
 0.615
ABC1578
Homoserine dehydrogenase.
  
   
 0.607
ABC2990
3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.603
ABC0544
Sodium:pantothenate symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.575
purN
Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
      
 0.566
ABC0023
Homoserine dehydrogenase.
      
 0.556
ABC0546
Transcriptional regulator.
 
     0.537
mmgC
acyl-CoA dehydrogenase.
 
 
 0.502
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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