STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC0582Conserved hypothetical protein. (312 aa)    
Predicted Functional Partners:
ABC0583
Conserved hypothetical protein.
 
     0.950
ABC0581
Conserved hypothetical protein.
 
     0.916
ABC0579
Conserved hypothetical protein.
 
     0.911
ABC0580
Conserved hypothetical protein.
 
     0.911
ABC0584
Aminopeptidase T.
 
     0.887
ABC0570
Conserved hypothetical protein.
 
     0.726
ABC0564
Oligopeptide ABC transporter substrate-binding protein.
 
    0.640
ABC0585
Major facilitator (MFS) superfamily protein.
       0.584
ABC0586
Tautomerase; Belongs to the 4-oxalocrotonate tautomerase family.
       0.584
ABC0578
Conserved hypothetical protein.
 
     0.547
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.