STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC0586Tautomerase; Belongs to the 4-oxalocrotonate tautomerase family. (72 aa)    
Predicted Functional Partners:
ABC0839
Conserved hypothetical protein.
    
 0.913
ABC3905
4-oxalocrotonate tautomerase.
     
  0.900
ABC0585
Major facilitator (MFS) superfamily protein.
 
     0.841
ABC0584
Aminopeptidase T.
       0.773
ABC0582
Conserved hypothetical protein.
       0.584
ABC0583
Conserved hypothetical protein.
       0.584
ABC0581
Conserved hypothetical protein.
       0.491
ABC0580
Conserved hypothetical protein.
       0.461
ABC0579
Conserved hypothetical protein.
       0.460
ABC0587
Chromate transporter.
       0.440
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.