STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC0592Conserved hypothetical protein. (454 aa)    
Predicted Functional Partners:
ABC2511
Spore coat protein.
  
     0.607
ABC2738
Hypothetical protein.
  
     0.600
ABC0392
Hypothetical protein.
  
     0.502
ABC2638
Conserved hypothetical protein.
  
     0.502
ABC1234
Transporter.
  
     0.499
ABC0620
Conserved hypothetical protein.
  
     0.481
ABC1600
Hypothetical protein.
  
     0.472
cssS
Two-component sensor histidine kinase.
  
     0.436
ABC1786
Conserved hypothetical protein.
  
     0.434
ABC2447
Conserved hypothetical protein.
  
     0.434
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.