STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC0593Xre family transcriptional regulator. (301 aa)    
Predicted Functional Partners:
spo0F
Stage 0 sporulation protein F.
    
 
 0.857
ABC3560
Transcriptional regulator.
 
   
 0.618
ABC0908
HAD superfamily hydrolase.
  
     0.606
ABC2093
Phage-related protein.
  
    0.604
ABC3787
Butirosin biosynthesis protein BtrG.
  
     0.598
ABC0654
Hypothetical protein.
  
     0.572
ABC2511
Spore coat protein.
  
     0.518
ABC0594
Conserved hypothetical protein.
       0.458
ABC3956
General stress protein 17M.
  
     0.451
ABC0844
Multidrug-efflux transporter.
  
     0.444
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.