Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABC0597 | ABC0598 | ABC0597 | ABC0598 | FMN reductase. | Nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein. | 0.983 |
ABC0597 | ABC0600 | ABC0597 | ABC0600 | FMN reductase. | Nitrate/sulfonate/bicarbonate ABC transporter permease. | 0.958 |
ABC0597 | ABC3393 | ABC0597 | ABC3393 | FMN reductase. | Nitrate/sulfonate/bicarbonate ABC transporter permease. | 0.841 |
ABC0597 | ABC3394 | ABC0597 | ABC3394 | FMN reductase. | Nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein. | 0.916 |
ABC0597 | ABC3399 | ABC0597 | ABC3399 | FMN reductase. | NADH-dependent FMN reductase. | 0.920 |
ABC0597 | cysH | ABC0597 | ABC0611 | FMN reductase. | Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.933 |
ABC0597 | ssuA | ABC0597 | ABC3715 | FMN reductase. | Nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein. | 0.914 |
ABC0597 | ssuB1 | ABC0597 | ABC0601 | FMN reductase. | Nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. | 0.950 |
ABC0597 | ssuC | ABC0597 | ABC3716 | FMN reductase. | Nitrate/sulfonate/bicarbonate ABC transporter permease. | 0.837 |
ABC0597 | ssuD | ABC0597 | ABC0599 | FMN reductase. | Alkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family. | 0.996 |
ABC0598 | ABC0597 | ABC0598 | ABC0597 | Nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein. | FMN reductase. | 0.983 |
ABC0598 | ABC0600 | ABC0598 | ABC0600 | Nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein. | Nitrate/sulfonate/bicarbonate ABC transporter permease. | 0.995 |
ABC0598 | ABC3393 | ABC0598 | ABC3393 | Nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein. | Nitrate/sulfonate/bicarbonate ABC transporter permease. | 0.984 |
ABC0598 | ABC3394 | ABC0598 | ABC3394 | Nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein. | Nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein. | 0.914 |
ABC0598 | ABC3399 | ABC0598 | ABC3399 | Nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein. | NADH-dependent FMN reductase. | 0.896 |
ABC0598 | ssuA | ABC0598 | ABC3715 | Nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein. | Nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein. | 0.913 |
ABC0598 | ssuB1 | ABC0598 | ABC0601 | Nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein. | Nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. | 0.995 |
ABC0598 | ssuC | ABC0598 | ABC3716 | Nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein. | Nitrate/sulfonate/bicarbonate ABC transporter permease. | 0.984 |
ABC0598 | ssuD | ABC0598 | ABC0599 | Nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein. | Alkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family. | 0.984 |
ABC0600 | ABC0597 | ABC0600 | ABC0597 | Nitrate/sulfonate/bicarbonate ABC transporter permease. | FMN reductase. | 0.958 |
page 1 of 5