STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC0609C4-dicarboxylate transport system permease small protein. (164 aa)    
Predicted Functional Partners:
ABC0608
C4-dicarboxylate transport system substrate-binding protein; Probable gene remnant. Similar to the C-terminal region of Kineococcus radiotolerans SRS30216 predicted dehydrogenases and related proteins Krad06003810 (362 aa); locus_tag:ABC0606.
 
  
 0.944
ABC0610
C4-dicarboxylate transport system permease large protein.
 
 
 0.934
ABC0299
C4-dicarboxylate transport system permease large protein.
 
 
 0.837
ABC0301
C4-dicarboxylate transport system substrate-binding protein.
 
  
 0.822
ABC1124
C4-dicarboxylate transport system substrate-binding protein.
 
  
 0.796
ABC4044
TRAP-type transport system permease large protein.
 
 
 0.794
ABC4079
C4-dicarboxylate transport system substrate-binding protein.
 
  
 0.793
ABC0439
C4-dicarboxylate transport system substrate-binding protein.
 
  
 0.790
ABC4046
TRAP-type transport system substrate-binding protein.
 
  
 0.781
ABC3357
C4-dicarboxylate transport system substrate-binding protein.
 
  
 0.771
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.