Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABC0615 | ABC0616 | ABC0615 | ABC0616 | uroporphyrin-III C-methyltransferase. | Conserved hypothetical protein. | 0.961 |
ABC0615 | ABC0617 | ABC0615 | ABC0617 | uroporphyrin-III C-methyltransferase. | Siroheme synthase. | 0.998 |
ABC0615 | cysC | ABC0615 | ABC0614 | uroporphyrin-III C-methyltransferase. | Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. | 0.912 |
ABC0615 | cysH | ABC0615 | ABC0611 | uroporphyrin-III C-methyltransferase. | Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.950 |
ABC0615 | cysI | ABC0615 | ABC0618 | uroporphyrin-III C-methyltransferase. | Sulfite reductase flavoprotein subunit; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH -> FAD -> FMN to the hemoprotein component. | 0.923 |
ABC0615 | cysJ | ABC0615 | ABC0619 | uroporphyrin-III C-methyltransferase. | Sulfite reductase hemoprotein beta subunit; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.962 |
ABC0615 | cysP | ABC0615 | ABC0613 | uroporphyrin-III C-methyltransferase. | Phosphate/sulphate permease. | 0.745 |
ABC0615 | gltA | ABC0615 | ABC2035 | uroporphyrin-III C-methyltransferase. | Glutamate synthase large subunit. | 0.439 |
ABC0615 | sat | ABC0615 | ABC0612 | uroporphyrin-III C-methyltransferase. | Sulfate adenylyltransferase; Belongs to the sulfate adenylyltransferase family. | 0.840 |
ABC0616 | ABC0615 | ABC0616 | ABC0615 | Conserved hypothetical protein. | uroporphyrin-III C-methyltransferase. | 0.961 |
ABC0616 | ABC0617 | ABC0616 | ABC0617 | Conserved hypothetical protein. | Siroheme synthase. | 0.996 |
ABC0616 | cysC | ABC0616 | ABC0614 | Conserved hypothetical protein. | Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. | 0.804 |
ABC0616 | cysH | ABC0616 | ABC0611 | Conserved hypothetical protein. | Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.850 |
ABC0616 | cysI | ABC0616 | ABC0618 | Conserved hypothetical protein. | Sulfite reductase flavoprotein subunit; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH -> FAD -> FMN to the hemoprotein component. | 0.778 |
ABC0616 | cysJ | ABC0616 | ABC0619 | Conserved hypothetical protein. | Sulfite reductase hemoprotein beta subunit; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.850 |
ABC0616 | cysP | ABC0616 | ABC0613 | Conserved hypothetical protein. | Phosphate/sulphate permease. | 0.760 |
ABC0616 | gltA | ABC0616 | ABC2035 | Conserved hypothetical protein. | Glutamate synthase large subunit. | 0.408 |
ABC0616 | sat | ABC0616 | ABC0612 | Conserved hypothetical protein. | Sulfate adenylyltransferase; Belongs to the sulfate adenylyltransferase family. | 0.642 |
ABC0617 | ABC0615 | ABC0617 | ABC0615 | Siroheme synthase. | uroporphyrin-III C-methyltransferase. | 0.998 |
ABC0617 | ABC0616 | ABC0617 | ABC0616 | Siroheme synthase. | Conserved hypothetical protein. | 0.996 |
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