STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC0644Conserved hypothetical protein; Probably catalyzes the deacetylation of acetylated carbohydrates an important step in the degradation of oligosaccharides. (243 aa)    
Predicted Functional Partners:
ABC0643
6-phospho-beta-glucosidase.
 
 
 0.886
licH
6-phospho-beta-glucosidase.
 
 
 0.767
ABC0642
C component PTS system cellobiose-specific enzyme II; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
   
 0.727
ABC0640
B component PTS system cellobiose-specific enzyme II.
 
   
 0.693
ABC0641
A component PTS system cellobiose-specific enzyme II.
 
   
 0.691
bglH
Beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
  
 
 0.517
ABC0482
C component PTS system cellobiose-specific enzyme II; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
   
 0.462
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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