STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gerKCSpore germination protein KC. (398 aa)    
Predicted Functional Partners:
gerKA
Spore germination protein KA.
 
  
 0.972
gerAA
Sopre germination protein.
 
  
 0.895
gerKB
Spore germination protein KB.
 
  
 0.892
gerBC
Spore germination protein.
  
   
 0.886
gerAB
Spore germination protein.
 
  
 0.883
ABC2003
Sopre germination protein.
 
  
 0.792
ABC3703
Spore germination protein.
 
  
 0.786
ABC2021
Spore germination protein.
 
  
 0.776
ABC2022
Spore germination protein.
 
  
 0.764
ABC0332
Germination protein.
 
  
 0.762
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.