Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABC0664Sugar ABC transporter substrate-binding protein. (392 aa)    
Predicted Functional Partners:
ABC0663
Sugar ABC transporter permease.
 
 0.989
ABC0662
Sugar ABC transporter permease.
 
  0.982
ABC3215
Sugar ABC transporter substrate-binding protein.
  
  
 
0.928
ABC3214
Sugar ABC transporter permease.
 
 0.889
msmX
Sugar ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.888
ABC3122
Sugar ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.888
ABC3213
Sugar ABC transporter permease.
  
  0.868
araM
L-arabinose operon protein AraM; Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol 1- phosphate (G1P). The G1P thus generated is probably used for the synthesis of phosphoglycerolipids in Gram-positive bacterial species. Belongs to the glycerol-1-phosphate dehydrogenase family.
 
  
 0.743
abfA
alpha-L-arabinofuranosidase.
 
  
 0.669
ABC0398
Sugar ABC transporter substrate-binding protein.
  
     0.579
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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