Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABC0675Phosphotriesterase. (306 aa)    
Predicted Functional Partners:
ABC0676
Conserved hypothetical protein.
 
     0.960
ABC0677
Conserved hypothetical protein.
 
  
 0.960
ABC0674
Conserved hypothetical protein.
 
    0.956
ABC0678
Conserved hypothetical protein.
 
     0.951
ABC0673
Conserved hypothetical protein.
 
     0.944
ABC0671
Conserved hypothetical protein.
 
     0.884
ABC0672
Conserved hypothetical protein.
  
    0.598
ABC3575
Hypothetical protein.
  
     0.468
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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