Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABC0688Conserved hypothetical protein; Belongs to the WXG100 family. (97 aa)    
Predicted Functional Partners:
ABC0691
DNA segregation ATPase.
 
 
 0.990
ABC0690
Conserved hypothetical protein.
 
  
 0.966
ABC0692
Conserved hypothetical protein.
 
   
 0.964
ABC0689
Conserved hypothetical protein; Belongs to the EsaB family.
     
 0.861
spoIIIE
DNA translocase stage III sporulation protein E; Belongs to the FtsK/SpoIIIE/SftA family.
  
 
 0.800
ABC2769
DNA translocase; Belongs to the FtsK/SpoIIIE/SftA family.
  
 
 0.800
ABC1051
Conserved hypothetical protein.
 
     0.691
ABC3948
Conserved hypothetical protein.
  
     0.623
ABC3367
Conserved hypothetical protein.
  
    0.503
ABC0693
Conserved hypothetical protein.
       0.432
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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