STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC0690Conserved hypothetical protein. (436 aa)    
Predicted Functional Partners:
ABC0691
DNA segregation ATPase.
 
  
 0.980
ABC0692
Conserved hypothetical protein.
 
  
 0.954
ABC0688
Conserved hypothetical protein; Belongs to the WXG100 family.
 
  
 0.927
ABC0689
Conserved hypothetical protein; Belongs to the EsaB family.
  
  
 0.873
ABC1051
Conserved hypothetical protein.
  
     0.699
ABC3948
Conserved hypothetical protein.
  
     0.656
ABC0693
Conserved hypothetical protein.
       0.641
ABC3983
Hypothetical protein.
 
    0.584
spoIIIE
DNA translocase stage III sporulation protein E; Belongs to the FtsK/SpoIIIE/SftA family.
  
  
 0.494
ABC2769
DNA translocase; Belongs to the FtsK/SpoIIIE/SftA family.
  
  
 0.494
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.