STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
narJRespiratory nitrate reductase delta chain. (230 aa)    
Predicted Functional Partners:
narG
Respiratory nitrate reductase alpha chain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.998
narH
Respiratory nitrate reductase beta chain.
 
 
 0.998
narI
Respiratory nitrate reductase gamma chain.
 
  
 0.996
ABC0722
Nitrate/nitrite transporter.
 
  
 0.967
nreA
Control of nitrate reduction.
 
     0.903
nreB
Two-component sensor histidine kinase of nitrate reduction.
 
     0.740
narK
Nitrate/nitrite transporter.
 
   
 0.732
nreC
Two-component response regulator of nitrate reduction.
 
   
 0.670
nasE
Assimilatory nitrite reductase [NAD(P)H] small subunit.
  
  
 0.632
moaA
Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
 
  
 0.614
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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